Under Construction

This phylogenetic tree is based on a consensus of the following publications: Cavalier-Smith and Chao 2004; Fast et al. 2002; Gajadhar et al. 1991; Harper et al. 2005; Kuvardina et al. 2002; Leander and Keeling, 2003, 2004; Leander et al. 2003; Moore et al. 2008; Noren et al. 1999; Saldarriaga et al. 2003; Silberman 2004.

Containing group: Eukaryotes

Introduction

The Alveolata is a monophyletic group of primarily single-celled eukaryotes that have adopted extremely diverse modes of nutrition, such as predation, photoautotrophy and intracellular parasitism.  Most alveolates fall into one of three main subgroups: ciliates (see the second cell, starting from the left, in the title image), dinoflagellates (see the third cell, starting from the left, in the title image), and apicomplexans (see the fourth cell, starting from the left, in the title image). Apicomplexans are obligate parasites; the name of the group stems from a novel apparatus at the anterior end of the parasites that facilitates host cell attachment and invasion.  This “apical complex” consists of a tubulin-based (closed) “conoid” that serves as a spring-like scaffolding for extrusive organelles called “rhoptries”. Apicomplexans infect (mostly) animal cells, ranging from the epithelial cells in the intestines of insects and marine invertebrates to the red blood cells of primates, including humans (e.g. Plasmodium is the causative agent of malaria). Some dinoflagellates are also parasites, but most are either free-living predators or photoautotrophs in aquatic habitats (Taylor 1987). Many photosynthetic dinoflagellates are also consumers of bacteria and other microeukaryotes, a mode of nutrition called “mixotrophy” (Stoecker 1999). The photosynthetic and mixotrophic species are very important players in oceanic carbon cycles, and some cause harmful (toxic) algal blooms when cell densities reach exceedingly high levels (Taylor 1987).  Dinoflagellates have novel cytoskeletal and nuclear features (e.g. permanently condensed chromosomes) that make them very distinctive among eukaryotes (Fensome et al. 1999). Ciliates are mainly dynamic predators that perform essential roles as consumers in microbial food webs, and like dinoflagellates and apicomplexans, this group is extremely diverse. Some ciliates, for instance, inhabit ruminant intestinal tracts, while others invade the flesh of fish. The best synapomorphies for ciliates are two heteromorphic nuclei and a cell cortex containing many cilia (i.e. short flagella) arranged in specific configurations.

Several known lineages of alveolates do not fit neatly within any of the three major subgroups discussed above, such as Colpodella (see the first and last cells in the title image), Chromera, Colponema, Ellobiopsids, Oxyrrhis, Rastrimonas, Parvilucifera, and Perkinsus (Brugerolle 2002, 2003; Dodge and Crawford 1971a,b; Fernandez et al. 1999; Mignot and Brugerolle 1975; Moore et al. 2008; Myl'nikov 1991, 2000; Noren et al. 1999; Perkins 1976, 1996; Saldarriaga et al. 2003; Siddall et al. 1997, 2001; Silberman 2004; Simpson and Patterson 1996).  Most of these lineages blur the distinction between predator and parasite and possess combinations of features that provide compelling insights into the earliest stages of alveolate evolution (e.g. the mosaic of character states in distant ancestors) (Leander and Keeling 2003; Cavalier-Smith and Chao 2004; Siddall et al. 2001). Colpodellids and perkinsids, for instance, have biflagellated predatory stages in their lifecycles that are remarkably similar to one another (e.g. they possess an apical complex with an open-sided conoid) (Myl'nikov 1991, 2000; Simpson and Patterson 1996). Colpodellids form the nearest sister lineage to apicomplexans, and perkinsids form the nearest sister lineage to dinoflagellates; therefore, the features shared by colpodellids and perkinsids are inferred to have been retained from the most recent ancestor of apicomplexans and dinoflagellates through morphostasis (Kuvardina et al. 2002; Leander and Keeling, 2003, 2004; Leander et al. 2003; Saldarriaga et al. 2003; Moore et al. 2008). The clade consisting of this particular ancestor and all of its descendent is called the “Myzozoa” (Cavalier-Smith and Chao 2004).

The Alveolata forms a sister group to two major clades of photosynthetic eukaryotes, namely the (ochrophyte) stramenopiles and the clade consisting of haptophytes and cryptophytes. Alveolates contain both photosynthetic lineages, such as Chromera and many dinoflagellates, and non-photosynthetic lineages, such as ciliates, colpodellids, apicomplexans and perkinsids.  Some members of the last two lineages have been shown to possess remnant (non-photosynthetic) plastids that are surrounded by four membranes, usually referred to as “apicoplasts” (Kilejian 1975; Matsuzaki et al. 2008; McFadden and Waller 1997; McFadden et al. 1996; Teles-Grilo et al. 2007; Wilson 1996). On one hand, dinoflagellates are known to have endosymbiotically gained and lost photosynthesis from different prey organisms several times independently throughout their history (Saldarriaga, J.F. et al. 2001; Shalchian-Tabrizi et al. 2006). On the other hand, there is no compelling cellular evidence that ciliates have ever had photosynthetic ancestors, despite the fact that many different lineages of ciliates are known to (temporarily) harbor photosynthetic symbionts (Johnson et al. 2007).  This complex set of phylogenetic and cell biological circumstances has made inferences about the evolutionary origins of photosynthesis in alveolates a very challenging, contentious, and exciting area of biodiversity research.

Characteristics

Despite the large morphological differences between ciliates, apicomplexans and dinoflagellates, alveolates share several morphological features:

• A system of abutting membranous sacs, called “alveoli”, positioned beneath the plasma membrane (synapomorphy); the alveoli can be empty (e.g. colpodellids and apicomplexans) or filled with cellulosic material (e.g. thecate dinoflagellates and some ciliates)
• Distinct micropores through the cell surface that function in pinocytosis (synapomorphy)
• Similar extrusive organelles (e.g. trichocysts)
• Closed mitosis
• Tubular mitochondrial cristae

Discussion of Phylogenetic Relationships

Molecular phylogenetic analyses of several different protein genes have firmly demonstrated that apicomplexans and dinoflagellates are more closely related to one another than either is to ciliates, forming the Myzozoa (Fast et al. 2002; Leander and Keeling 2004; Gajadhar et al. 1991). Similar analyses have shown that perkinsids, which are parasites of mollusks and microeukaryotes, form the nearest sister lineage to dinoflagellates (Bushek et al. 2002; Ellis et al. 1998; Goggin and Barker 1993; Noren et al. 1999; Reece et al. 1997; Saldarriaga et al. 2003; Leander and Keeling 2004). Phylogenetic analyses of small subunit rRNA sequences indicate that free-living colpodellids and the photosynthetic coral symbiont Chromera are not specifically related to perkinsids, but instead are sister groups to apicomplexans (Kuvardina et al. 2002; Leander et al. 2003; Cavalier-Smith and Chao 2004; Moore et al. 2008).  Phylogenies based on small subunit rDNA sequences have also indicated that ellobiopsids, enigmatic marine parasites of planktonic crustaceans, are alveolates with an uncertain position within the group (Silberman et al. 2004).  Some morphological features of ellobiopsids indicate a close affinity with some parasitic relatives of dinoflagellates, such as “syndinians” (see the Dinoflagellates page). Overall, current evidence suggests that the early evolutionary history of alveolates involved voracious (colpodellid-like) predators of eukaryotic cells that ultimately diversified into (1) the specialized parasites seen in apicomplexans, perkinsids and ellobioposids; (2) the highly sophisticated consumers seen in ciliates; and (3) the complex assortment of predatory and (secondary) photoautotrophic cells seen in dinoflagellates.

Other Names for Alveolates

• Alveolata

References

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Information on the Internet

• Introduction to the Alveolates. UCMP Berkeley.